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Sample GSM1014526 Query DataSets for GSM1014526
Status Public on Oct 03, 2012
Title UW_DnaseDgf_GM12865
Sample type SRA
Source name GM12865
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: GM12865
cell organism: human
cell description: B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed
cell lineage: mesoderm
cell sex: F
labexpid: DS12436
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider Coriell
Growth protocol GM12865_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX193598
BioSample SAMN01761107
Named Annotation GSM1014526_hg19_wgEncodeUwDgfGm12865Raw.bigWig
Named Annotation GSM1014526_hg19_wgEncodeUwDgfGm12865Sig.bigWig

Supplementary file Size Download File type/resource
GSM1014526_hg19_wgEncodeUwDgfGm12865Hotspots.broadPeak.gz 3.1 Mb (ftp)(http) BROADPEAK
GSM1014526_hg19_wgEncodeUwDgfGm12865Pk.narrowPeak.gz 2.3 Mb (ftp)(http) NARROWPEAK
GSM1014526_hg19_wgEncodeUwDgfGm12865Raw.bigWig 336.1 Mb (ftp)(http) BIGWIG
GSM1014526_hg19_wgEncodeUwDgfGm12865Sig.bigWig 498.0 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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