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Sample GSM1014525 Query DataSets for GSM1014525
Status Public on Oct 03, 2012
Title UW_DnaseDgf_CD20+_RO01778
Sample type SRA
Source name CD20+_RO01778
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: CD20+_RO01778
cell organism: human
cell description: B cells, caucasian, draw number 1, newly promoted to tier 2: not in 2011 analysis
cell karyotype: normal
cell lineage: mesoderm
cell sex: F
labexpid: DS18208
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider Rajinder Kaul, UW
Growth protocol CD20+_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (2)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
GSE51341 Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence
SRA SRX193597
BioSample SAMN01761106
Named Annotation GSM1014525_hg19_wgEncodeUwDgfCd20ro01778Raw.bigWig
Named Annotation GSM1014525_hg19_wgEncodeUwDgfCd20ro01778Sig.bigWig

Supplementary file Size Download File type/resource
GSM1014525_hg19_wgEncodeUwDgfCd20ro01778Hotspots.broadPeak.gz 2.5 Mb (ftp)(http) BROADPEAK
GSM1014525_hg19_wgEncodeUwDgfCd20ro01778Pk.narrowPeak.gz 1.7 Mb (ftp)(http) NARROWPEAK
GSM1014525_hg19_wgEncodeUwDgfCd20ro01778Raw.bigWig 332.7 Mb (ftp)(http) BIGWIG
GSM1014525_hg19_wgEncodeUwDgfCd20ro01778Sig.bigWig 493.3 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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