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Sample GSM1014523 Query DataSets for GSM1014523
Status Public on Oct 03, 2012
Title UW_DnaseDgf_Treg_Wb78495824
Sample type SRA
Source name Treg_Wb78495824
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: Treg_Wb78495824
cell organism: human
cell description: T regulatory cells in vivo isolation
cell karyotype: normal donor is Causasian, female 35 year old, primary pheresis of single normal subject
cell lineage: mesoderm
cell sex: F
treatment: None
treatment description: No special treatment or protocol applies
labexpid: DS14702
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider John Stamatoyannopoulos
Treatment protocol None
Growth protocol AdultCD4naiveTcell_Crawford.v2_PlusStam.v1_SOP.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (2)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
GSE51341 Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence
SRA SRX193595
BioSample SAMN01761104
Named Annotation GSM1014523_hg19_wgEncodeUwDgfTregwb78495824Raw.bigWig
Named Annotation GSM1014523_hg19_wgEncodeUwDgfTregwb78495824Sig.bigWig

Supplementary file Size Download File type/resource
GSM1014523_hg19_wgEncodeUwDgfTregwb78495824Hotspots.broadPeak.gz 2.5 Mb (ftp)(http) BROADPEAK
GSM1014523_hg19_wgEncodeUwDgfTregwb78495824Pk.narrowPeak.gz 1.9 Mb (ftp)(http) NARROWPEAK
GSM1014523_hg19_wgEncodeUwDgfTregwb78495824Raw.bigWig 335.9 Mb (ftp)(http) BIGWIG
GSM1014523_hg19_wgEncodeUwDgfTregwb78495824Sig.bigWig 483.4 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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