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Sample GSM1014522 Query DataSets for GSM1014522
Status Public on Oct 03, 2012
Title UW_DnaseDgf_Th2_Wb54553204
Sample type SRA
Source name Th2_Wb54553204
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: Th2_Wb54553204
cell organism: human
cell description: Th2 cells in vivo isolation, donor is Caucasian, male 33 year old, primary pheresis of single normal subject
cell karyotype: normal
cell lineage: mesoderm
cell sex: M
treatment: None
treatment description: No special treatment or protocol applies
labexpid: DS17597
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider John Stamatoyannopoulos
Treatment protocol None
Growth protocol AdultCD4naiveTcell_Crawford.v2_PlusStam.v1_SOP.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX193594
BioSample SAMN01761103
Named Annotation GSM1014522_hg19_wgEncodeUwDgfTh2wb54553204Raw.bigWig
Named Annotation GSM1014522_hg19_wgEncodeUwDgfTh2wb54553204Sig.bigWig

Supplementary file Size Download File type/resource
GSM1014522_hg19_wgEncodeUwDgfTh2wb54553204Hotspots.broadPeak.gz 2.1 Mb (ftp)(http) BROADPEAK
GSM1014522_hg19_wgEncodeUwDgfTh2wb54553204Pk.narrowPeak.gz 1.9 Mb (ftp)(http) NARROWPEAK
GSM1014522_hg19_wgEncodeUwDgfTh2wb54553204Raw.bigWig 337.6 Mb (ftp)(http) BIGWIG
GSM1014522_hg19_wgEncodeUwDgfTh2wb54553204Sig.bigWig 513.9 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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