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Sample GSM1014521 Query DataSets for GSM1014521
Status Public on Oct 03, 2012
Title UW_DnaseDgf_Th2
Sample type SRA
Source name Th2
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: Th2
cell organism: human
cell description: primary Th2 T cells
cell lineage: mesoderm
cell sex: U
treatment: None
treatment description: No special treatment or protocol applies
labexpid: DS17603
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider Stam lab
Treatment protocol None
Growth protocol AdultCD4naiveTcell_Crawford.v2_PlusStam.v1_SOP.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX193593
BioSample SAMN01761102
Named Annotation GSM1014521_hg19_wgEncodeUwDgfTh2Raw.bigWig
Named Annotation GSM1014521_hg19_wgEncodeUwDgfTh2Sig.bigWig

Supplementary file Size Download File type/resource
GSM1014521_hg19_wgEncodeUwDgfTh2Hotspots.broadPeak.gz 2.6 Mb (ftp)(http) BROADPEAK
GSM1014521_hg19_wgEncodeUwDgfTh2Pk.narrowPeak.gz 1.8 Mb (ftp)(http) NARROWPEAK
GSM1014521_hg19_wgEncodeUwDgfTh2Raw.bigWig 390.1 Mb (ftp)(http) BIGWIG
GSM1014521_hg19_wgEncodeUwDgfTh2Sig.bigWig 841.0 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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