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Sample GSM1014519 Query DataSets for GSM1014519
Status Public on Oct 03, 2012
Title UW_DnaseDgf_HMVEC-LBl
Sample type SRA
Source name HMVEC-LBl
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: HMVEC-LBl
cell organism: human
cell description: blood microvascular endothelial cells, lung-derived
cell karyotype: normal
cell lineage: mesoderm
cell sex: F
labexpid: DS13372
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider Lonza
Growth protocol HMVEC-Lbl_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX193591
BioSample SAMN01761100
Named Annotation GSM1014519_hg19_wgEncodeUwDgfHmvechRaw.bigWig
Named Annotation GSM1014519_hg19_wgEncodeUwDgfHmvechSig.bigWig

Supplementary file Size Download File type/resource
GSM1014519_hg19_wgEncodeUwDgfHmvechHotspots.broadPeak.gz 3.7 Mb (ftp)(http) BROADPEAK
GSM1014519_hg19_wgEncodeUwDgfHmvechPk.narrowPeak.gz 2.7 Mb (ftp)(http) NARROWPEAK
GSM1014519_hg19_wgEncodeUwDgfHmvechRaw.bigWig 378.9 Mb (ftp)(http) BIGWIG
GSM1014519_hg19_wgEncodeUwDgfHmvechSig.bigWig 720.1 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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