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Sample GSM1014518 Query DataSets for GSM1014518
Status Public on Oct 03, 2012
Title UW_DnaseDgf_HCFaa
Sample type SRA
Source name HCFaa
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: HCFaa
cell organism: human
cell description: cardiac fibroblasts- adult atrial
cell karyotype: normal
cell lineage: mesoderm
cell sex: F
labexpid: DS13480
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider ScienCell
Growth protocol HCFaa_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX193590
BioSample SAMN01761099
Named Annotation GSM1014518_hg19_wgEncodeUwDgfHcfaaRaw.bigWig
Named Annotation GSM1014518_hg19_wgEncodeUwDgfHcfaaSig.bigWig

Supplementary file Size Download File type/resource
GSM1014518_hg19_wgEncodeUwDgfHcfaaHotspots.broadPeak.gz 3.8 Mb (ftp)(http) BROADPEAK
GSM1014518_hg19_wgEncodeUwDgfHcfaaPk.narrowPeak.gz 3.1 Mb (ftp)(http) NARROWPEAK
GSM1014518_hg19_wgEncodeUwDgfHcfaaRaw.bigWig 357.6 Mb (ftp)(http) BIGWIG
GSM1014518_hg19_wgEncodeUwDgfHcfaaSig.bigWig 640.9 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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