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Sample GSM1014515 Query DataSets for GSM1014515
Status Public on Oct 03, 2012
Title UW_DnaseDgf_HCM
Sample type SRA
Source name HCM
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: HCM
cell organism: human
cell description: cardiac myocytes
cell karyotype: normal
cell lineage: mesoderm
cell sex: U
labexpid: DS12599
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider ScienCell
Growth protocol HCM_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX193587
BioSample SAMN01761095
Named Annotation GSM1014515_hg19_wgEncodeUwDgfHcmRaw.bigWig
Named Annotation GSM1014515_hg19_wgEncodeUwDgfHcmSig.bigWig

Supplementary file Size Download File type/resource
GSM1014515_hg19_wgEncodeUwDgfHcmHotspots.broadPeak.gz 3.5 Mb (ftp)(http) BROADPEAK
GSM1014515_hg19_wgEncodeUwDgfHcmPk.narrowPeak.gz 2.9 Mb (ftp)(http) NARROWPEAK
GSM1014515_hg19_wgEncodeUwDgfHcmRaw.bigWig 290.4 Mb (ftp)(http) BIGWIG
GSM1014515_hg19_wgEncodeUwDgfHcmSig.bigWig 396.4 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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