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Sample GSM1014514 Query DataSets for GSM1014514
Status Public on Oct 03, 2012
Title UW_DnaseDgf_HSMM
Sample type SRA
Source name HSMM
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: HSMM
cell organism: human
cell description: skeletal muscle myoblasts
cell karyotype: normal
cell lineage: mesoderm
cell sex: U
labexpid: DS14426
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider Refer to the protocol documents for differing sources
Growth protocol HSMM_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX193586
BioSample SAMN01761094
Named Annotation GSM1014514_hg19_wgEncodeUwDgfHsmmRaw.bigWig
Named Annotation GSM1014514_hg19_wgEncodeUwDgfHsmmSig.bigWig

Supplementary file Size Download File type/resource
GSM1014514_hg19_wgEncodeUwDgfHsmmHotspots.broadPeak.gz 4.6 Mb (ftp)(http) BROADPEAK
GSM1014514_hg19_wgEncodeUwDgfHsmmPk.narrowPeak.gz 3.6 Mb (ftp)(http) NARROWPEAK
GSM1014514_hg19_wgEncodeUwDgfHsmmRaw.bigWig 346.7 Mb (ftp)(http) BIGWIG
GSM1014514_hg19_wgEncodeUwDgfHsmmSig.bigWig 568.3 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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