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Sample GSM1014510 Query DataSets for GSM1014510
Status Public on Oct 03, 2012
Title UW_DnaseDgf_HVMF
Sample type SRA
Source name HVMF
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: HVMF
cell organism: human
cell description: villous mesenchymal fibroblast cells
cell karyotype: normal
cell sex: U
labexpid: DS13981
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider ScienCell
Growth protocol HVMF_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX193582
BioSample SAMN01761090
Named Annotation GSM1014510_hg19_wgEncodeUwDgfHvmfRaw.bigWig
Named Annotation GSM1014510_hg19_wgEncodeUwDgfHvmfSig.bigWig

Supplementary file Size Download File type/resource
GSM1014510_hg19_wgEncodeUwDgfHvmfHotspots.broadPeak.gz 3.7 Mb (ftp)(http) BROADPEAK
GSM1014510_hg19_wgEncodeUwDgfHvmfPk.narrowPeak.gz 3.0 Mb (ftp)(http) NARROWPEAK
GSM1014510_hg19_wgEncodeUwDgfHvmfRaw.bigWig 335.5 Mb (ftp)(http) BIGWIG
GSM1014510_hg19_wgEncodeUwDgfHvmfSig.bigWig 504.1 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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