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Sample GSM1014509 Query DataSets for GSM1014509
Status Public on Oct 03, 2012
Title UW_DnaseDgf_NHLF
Sample type SRA
Source name NHLF
Organism Homo sapiens
Characteristics lab: UW
lab description: Stamatoyannopoulous - University of Washington
datatype: DnaseDgf
datatype description: DNase Digital Footprinting
cell: NHLF
cell organism: human
cell description: lung fibroblasts
cell karyotype: normal
cell lineage: endoderm
cell sex: U
labexpid: DS12829
labversion: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75
Biomaterial provider Lonza
Growth protocol NHLF_Stam_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol For more information, see
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina HiSeq 2000
Data processing
Submission date Oct 03, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE26328 DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]
SRA SRX193581
BioSample SAMN01761089
Named Annotation GSM1014509_hg19_wgEncodeUwDgfNhlfRaw.bigWig
Named Annotation GSM1014509_hg19_wgEncodeUwDgfNhlfSig.bigWig

Supplementary file Size Download File type/resource
GSM1014509_hg19_wgEncodeUwDgfNhlfHotspots.broadPeak.gz 4.0 Mb (ftp)(http) BROADPEAK
GSM1014509_hg19_wgEncodeUwDgfNhlfPk.narrowPeak.gz 3.1 Mb (ftp)(http) NARROWPEAK
GSM1014509_hg19_wgEncodeUwDgfNhlfRaw.bigWig 326.4 Mb (ftp)(http) BIGWIG
GSM1014509_hg19_wgEncodeUwDgfNhlfSig.bigWig 496.9 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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