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Sample GSM1010874 Query DataSets for GSM1010874
Status Public on Sep 28, 2012
Title HudsonAlpha_ChipSeq_ECC-1_RevXlinkChromatin_v042211.1
Sample type SRA
Source name ECC-1
Organism Homo sapiens
Characteristics datatype: ChipSeq
datatype description: Chromatin IP Sequencing
controlid: SL16754,SL13506
labexpid: SL16754,SL13506
cell: ECC-1
cell organism: human
cell description: epithelial cell line derived from an endometrium adenocarcinoma, fetal membranes were collected from women who underwent planned cesarean delivery at term, before labor and without rupture of membranes
cell karyotype: cancer
cell lineage: endoderm
cell sex: F
antibody: RevXlinkChromatin
treatment: None
treatment description: No special treatment or protocol applies
protocol: v042211.1
protocol description: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)
controlid: SL16754,SL13506
labexpid: SL16754,SL13506
replicate: 1,2
Biomaterial provider ATCC
Treatment protocol None
Growth protocol ECC1_Myers_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
Data processing
Submission date Sep 28, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9052
Series (1)
GSE32465 Transcription Factor Binding Sites by ChIP-seq from ENCODE/HAIB
SRA SRX190330
BioSample SAMN01731759
Named Annotation GSM1010874_hg19_wgEncodeHaibTfbsEcc1RxlchV0422111RawRep1.bigWig
Named Annotation GSM1010874_hg19_wgEncodeHaibTfbsEcc1RxlchV0422111RawRep2.bigWig

Supplementary file Size Download File type/resource
GSM1010874_hg19_wgEncodeHaibTfbsEcc1RxlchV0422111RawRep1.bigWig 248.4 Mb (ftp)(http) BIGWIG
GSM1010874_hg19_wgEncodeHaibTfbsEcc1RxlchV0422111RawRep2.bigWig 130.0 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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