GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM1003477 Query DataSets for GSM1003477
Status Public on Sep 13, 2012
Title Broad_ChipSeq_CD20+_Control
Sample type SRA
Source name CD20+
Organism Homo sapiens
Characteristics donor_id: ENCDO115AAA,ENCDO114AAA
biomaterial_type: primary cell
cell_type: B cell
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
controlid: wgEncodeEH003132
replicate: 1,2
cell: CD20+
cell organism: human
cell description: B cells from donors RO01778 and RO01794, newly promoted to tier 2: not in 2011 analysis
cell karyotype: normal
cell lineage: mesoderm
cell sex: F
antibody: Control
treatment: None
treatment description: No special treatment or protocol applies
control: std
control description: Standard input signal for most experiments.
controlid: CD20+/None/Input/std
labversion: Illumina_HiSeq_2000
labversion description: Illumina HiSeq 2000
replicate: 1
Biomaterial provider Dr. Heimfeld Lab at FHCRC
Treatment protocol None
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2000
Data processing
Submission date Sep 13, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL11154
Series (1)
GSE29611 Histone Modifications by ChIP-seq from ENCODE/Broad Institute
SRA SRX186673
BioSample SAMN01174089
Named Annotation GSM1003477_hg19_wgEncodeBroadHistoneCd20ControlSig.bigWig

Supplementary file Size Download File type/resource
GSM1003477_hg19_wgEncodeBroadHistoneCd20ControlSig.bigWig 576.7 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap