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Series GSE99457 Query DataSets for GSE99457
Status Public on Jul 10, 2017
Title Injury-inducible stem cell potential of the intestinal enteroendocrine lineage: single-cell mRNA-seq profiling
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report the single-cell transcriptomic profiles of Bmi1-GFP+ and Prox1-GFP+ cells in comparison to Lgr5-eGFP+ and Lgr5-eGFP- cells
 
Overall design Primary epithelial cells were isolated from Bmi1-GFP, Prox1-GFP or Lgr5-eGFP reporter mice and subjected to single-cell mRNA-seq
 
Contributor(s) Yan K, Kuo C, Zheng G
Citation(s) 28686870
Submission date May 30, 2017
Last update date May 15, 2019
Contact name Kelley Yan
E-mail ky2004@cumc.columbia.edu
Organization name Columbia University
Department Medicine
Street address 650 W. 168th St., BB8-801B
City New York
State/province NY
ZIP/Postal code 10032
Country USA
 
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (10)
GSM2644345 Original_Prox1_1
GSM2644346 Original_Prox1_2
GSM2644347 Bmi1_1
Relations
BioProject PRJNA388493
SRA SRP108296

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE99457_RAW.tar 39.6 Mb (http)(custom) TAR (of MTX, TSV)
Raw data are available in SRA
Processed data provided as supplementary file

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