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GEO accession:
Series GSE99403
Query DataSets for GSE99403
Status
Public on Dec 06, 2017
Title
Synthetic transcription elongation factors
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
29192133
Submission date
May 30, 2017
Last update date
May 15, 2019
Contact name
Aseem Ansari
Organization name
University of Wisconsin-Madison
Department
Biochemistry and The Genome Center
Lab
Ansari
Street address
440 Henry Mall
City
Madison
State/province
WI
ZIP/Postal code
53706
Country
USA
Platforms (2)
GPL16791
Illumina HiSeq 2500 (Homo sapiens)
GPL18573
Illumina NextSeq 500 (Homo sapiens)
Samples (58)
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More...
GSM2643484
1000nM_JQ1_GM15850_Rep1
GSM2643485
1000nM_JQ1_GM15850_Rep2
GSM2643486
1000nM_JQ1_GM15850_Rep3
GSM2643487
1000nM_JQ1_GM15850_Rep4
GSM2643488
1000nM_JQ1_GM15851_Rep1
GSM2643489
1000nM_JQ1_GM15851_Rep2
GSM2643490
1000nM_JQ1_GM15851_Rep3
GSM2643491
1000nM_JQ1_GM15851_Rep4
GSM2643492
1000nM_PA1_GM15850_Rep1
GSM2643493
1000nM_PA1_GM15850_Rep2
GSM2643494
1000nM_PA1_GM15850_Rep3
GSM2643495
1000nM_PA1_GM15850_Rep4
GSM2643496
1000nM_PA1_GM15851_Rep1
GSM2643497
1000nM_PA1_GM15851_Rep2
GSM2643498
1000nM_PA1_GM15851_Rep3
GSM2643499
1000nM_PA1_GM15851_Rep4
GSM2643500
1000nM_PA1+JQ1_GM15850_Rep1
GSM2643501
1000nM_PA1+JQ1_GM15850_Rep2
GSM2643502
1000nM_PA1+JQ1_GM15850_Rep3
GSM2643503
1000nM_PA1+JQ1_GM15850_Rep4
GSM2643504
1000nM_PA1+JQ1_GM15851_Rep1
GSM2643505
1000nM_PA1+JQ1_GM15851_Rep2
GSM2643506
1000nM_PA1+JQ1_GM15851_Rep3
GSM2643507
1000nM_PA1+JQ1_GM15851_Rep4
GSM2643508
1000nM_Syn-TEF1_GM15850_Rep1
GSM2643509
1000nM_Syn-TEF1_GM15850_Rep2
GSM2643510
1000nM_Syn-TEF1_GM15850_Rep3
GSM2643511
1000nM_Syn-TEF1_GM15850_Rep4
GSM2643512
1000nM_Syn-TEF1_GM15851_Rep1
GSM2643513
1000nM_Syn-TEF1_GM15851_Rep2
GSM2643514
1000nM_Syn-TEF1_GM15851_Rep3
GSM2643515
1000nM_Syn-TEF1_GM15851_Rep4
GSM2643516
DMSO_GM15850_Rep1
GSM2643517
DMSO_GM15850_Rep2
GSM2643518
DMSO_GM15850_Rep3
GSM2643519
DMSO_GM15850_Rep4
GSM2643520
DMSO_GM15851_Rep1
GSM2643521
DMSO_GM15851_Rep2
GSM2643522
DMSO_GM15851_Rep3
GSM2643523
DMSO_GM15851_Rep4
GSM2643536
BRD4_Input_1000nM_PA1+JQ1
GSM2643537
BRD4_Input_1000nM_Syn-TEF1
GSM2643538
BRD4_Input_DMSO
GSM2643539
BRD4_IP_1000nM_PA1+JQ1
GSM2643540
BRD4_IP_1000nM_Syn-TEF1
GSM2643541
BRD4_IP_DMSO
GSM2643542
Pol2_Input_1000nM_PA1+JQ1
GSM2643543
Pol2_Input_1000nM_Syn-TEF1
GSM2643544
Pol2_Input_DMSO
GSM2643545
Pol2_IP_1000nM_PA1+JQ1
GSM2643546
Pol2_IP_1000nM_Syn-TEF1
GSM2643547
Pol2_IP_DMSO
GSM2643548
pSer2_Input_1000nM_PA1+JQ1
GSM2643549
pSer2_Input_1000nM_Syn-TEF1
GSM2643550
pSer2_Input_DMSO
GSM2643551
pSer2_IP_1000nM_PA1+JQ1
GSM2643552
pSer2_IP_1000nM_Syn-TEF1
GSM2643553
pSer2_IP_DMSO
This SuperSeries is composed of the following SubSeries:
GSE99400
RNA-seq of GM15850 and GM15851 cells treated with synthetic transcription elongation factors.
GSE99402
ChIP-RX of GM15850 cells treated with synthetic transcription elongation factors
Relations
BioProject
PRJNA388392
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
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Series Matrix File(s)
TXT
Supplementary data files not provided
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