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Series GSE98247 Query DataSets for GSE98247
Status Public on Sep 28, 2020
Title Transcriptome profile of a stable clone overexpressing TFEB in HEK293 cells by TET-OFF system (HEK293-PFL-TFEB).
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary In order to identify the transcriptomic effects of TFEB overexpression, we performed a time series RNASeq experiments
Overall design Total RNA was extracted at time 0 in presence of tetracycline to evaluate the basal expression level of TFEB and at each time point (from 6 to 90h) from the removal of tetracyclineto evaluate the effect of TFEB overexpression.
Contributor(s) De Cegli R, Moretti MN
Citation(s) 32978159
Submission date Apr 26, 2017
Last update date Jul 25, 2021
Contact name Rossella De Cegli
Phone 08119230692
Organization name Tigem
Street address Via Campi Flegrei 34
City Pozzuoli
ZIP/Postal code 80078
Country Italy
Platforms (1)
GPL15433 Illumina HiSeq 1000 (Homo sapiens)
Samples (16)
GSM2589827 HEK293-PFL-TFEB cells grown in presence of Tetracycline (CTRL)
GSM2589828 HEK293-PFL-TFEB cells grown in absence of Tetracycline for 6 hours
GSM2589829 HEK293-PFL-TFEB cells grown in absence of Tetracycline for 12 hours
This SubSeries is part of SuperSeries:
GSE98248 TFEB in HEK293 cells by TET-OFF system (HEK293-PFL-TFEB).
BioProject PRJNA384390
SRA SRP105280

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98247_RAW.tar 3.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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