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Series GSE98044 Query DataSets for GSE98044
Status Public on Apr 22, 2017
Title Single-cell profiling of tumor infiltrating T cells and macrophages [Nanostring]
Organism Mus musculus
Experiment type Expression profiling by array
Summary Effective therapies for non-small cell lung cancer (NSCLC) remain challenging despite an increasingly comprehensive understanding of somatically altered oncogenic pathways. It is now clear that therapeutic agents with potential to impact the tumor immune microenvironment potentiate immune-orchestrated therapeutic benefit. Herein we evaluated the immunoregulatory properties of histone deacetylase (HDAC) and bromodomain inhibitors, two classes of drugs that modulate the epigenome, with a focus on key cell subsets that are engaged in an immune response. By evaluating human peripheral blood and NSCLC tumors, we show that the selective HDAC6 inhibitor ricolinostat promotes phenotypic changes that support enhanced T cell activation and improved function of antigen presenting cells. The bromodomain inhibitor JQ1 attenuated CD4+Foxp3+ T regulatory cell suppressive function and synergized with ricolinostat to facilitate immune-mediated tumor growth arrest, leading to prolonged survival of mice with lung adenocarcinomas. Collectively, our findings highlight the immunomodulatory effects of two epigenetic modifiers that, together, promote T cell-mediated anti-tumor immunity and demonstrate their therapeutic potential for treatment of NSCLC.
6 Kras-mutant/p53-deficient lung tumors T cells and macrophages were analyzed wth Nanostring mouse PanCancer immune module
 
Overall design Gene expression analyses of tumor-infiltrating T cells and macrophages in lung tumor-bearing mice treated with Vehicle (control), ricolinostat (HDAC inhibitor), or JQ1 (Bromodomain inhibitor)
 
Contributor(s) Dries R, Adeegbe DO, Yan L
Citation(s) 28408401
Submission date Apr 21, 2017
Last update date Jul 25, 2021
Contact name Ruben Dries
E-mail(s) rubendries@gmail.com
Organization name DFCI
Department Computational Biology
Lab Longwood Center
Street address 360 Longwood Ave
City Boston
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL22364 nCounter Mouse PanCancer Immune Profiling Panel
Samples (12)
GSM2585948 Vehicle-treated T cells [DA_13_04.RCC]
GSM2585949 Vehicle-treated T cells [DA_14_05.RCC]
GSM2585950 JQ1-treated T cells[DA_8_01.RCC]
This SubSeries is part of SuperSeries:
GSE98049 Synergistic Immunostimulatory Effects and Therapeutic Benefit of Combined Histone Deacetylase and Bromodomain Inhibition in Non-small Cell Lung Cancer.
Relations
BioProject PRJNA383804

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98044_RAW.tar 120.0 Kb (http)(custom) TAR (of RCC)
Processed data included within Sample table

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