|
| Status |
Public on Jan 01, 2018 |
| Title |
The role of the TGF-β/DBL-1 pathway in shaping the C. elegans gut microbiota |
| Organism |
Caenorhabditis elegans |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Comparison of gene expression profiles of Caenorhabditis elegans fed a complex microbiota (either a synthetic community or in soil) or a standard Escherichia coli diet. We find that immune and digestion genes are up-regulated in C. elegans that were fed a complex microbiota.
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| |
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| Overall design |
C. elegans were fed a complex microbiota (either a synthetic community or in soil) or a standard E. coli diet.
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| |
|
| Contributor(s) |
Berg M, Shapira M |
| Citation missing |
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| |
| Submission date |
Apr 18, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Maureen Berg |
| Organization name |
UC Berkeley
|
| Street address |
3040 Valley Life Sciences Building # 3140
|
| City |
Berkeley |
| State/province |
CA |
| ZIP/Postal code |
94720-3140 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL22765 |
Illumina HiSeq 4000 (Caenorhabditis elegans) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA383382 |
| SRA |
SRP104170 |
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