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Series GSE97538 Query DataSets for GSE97538
Status Public on Jul 03, 2018
Title RNAseq data from FACS-sorted microglia from mouse brain from control mice (uninjected) or LPS-injected mice in the context of A20 knockout
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Using RNAseq, we compared the mRNA profiles of microglia in wild type or microglia-specific A20 knockout mice. These mice were either untreated or intraperitoneally injected with LPS (3.5 mg/kg).
 
Overall design Microglial mRNA profiles were generated from wild type or microglia-specific A20 knockout mice either untreated or injected with LPS.
 
Contributor(s) Voet S, Hagemeyer N, Prinz M, Staszewski O, van Loo G
Citation(s) 29789522
Submission date Apr 07, 2017
Last update date May 15, 2019
Contact name Ori Staszewski
E-mail(s) ori.staszewski@uniklinik-freiburg.de
Organization name University Medical Center Freiburg
Department Institute of Neuropathology
Street address Breisacher Str. 64
City Freiburg
ZIP/Postal code D-79106
Country Germany
 
Platforms (1)
GPL15103 Illumina HiSeq 1000 (Mus musculus)
Samples (19)
GSM2571747 Wild-type (WT) unstimulated [4848_MG]
GSM2571748 Wild-type (WT) unstimulated [5221_MG]
GSM2571749 Wild-type (WT) unstimulated [4847_MG]
This SubSeries is part of SuperSeries:
GSE107733 Microglia-expressed A20 regulates synapse formation and inhibits inflammasome-dependent neuroinflammation
Relations
BioProject PRJNA382190
SRA SRP103751

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97538_Voom_Matrix.txt.gz 2.6 Mb (ftp)(http) TXT
GSE97538_counts.txt.gz 4.0 Mb (ftp)(http) TXT
GSE97538_cpm.txt.gz 2.6 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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