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Series GSE97478 Query DataSets for GSE97478
Status Public on Aug 22, 2018
Title Single cell RNA sequencing of interneurons of the mouse dorsolateral striatum I
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In this study we performed single-cell sequencing of striatal interneurons, revealing striatal populations as well as the relation to their telencephalic counterparts
 
Overall design FACS-sorted single cells isolated from the dorso-lateral striatum from either a 5ht3a-EGFP mouse line or a Lhx6-cre mouse crossed onto a R26R-tdTomato reporter mouse line
 
Contributor(s) Munoz-Manchado AB, Zeisel A, Linnarsson S, Hjerling-Leffler J
Citation(s) 30134177
Submission date Apr 06, 2017
Last update date May 15, 2019
Contact name Sten Linnarsson
Organization name Karolinska Institutet
Department Medical Biochemistry and Biophysics
Lab Molecular Neurobiology
Street address Scheeles väg 1
City Stockholm
ZIP/Postal code 171 65
Country Sweden
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (1122)
GSM2568856 1772062117_A01
GSM2568857 1772062117_A02
GSM2568858 1772062117_A03
This SubSeries is part of SuperSeries:
GSE106708 Single cell RNA sequencing of interneurons of the mouse dorsolateral striatum
Relations
BioProject PRJNA381946
SRA SRP103949

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97478_Munoz-Manchado_et_al_molecule_count.txt.gz 3.3 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data is available on Series record

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