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Series GSE97249 Query DataSets for GSE97249
Status Public on May 26, 2017
Title Cell intrinsic changes in transcription of naïve CD4 T cells upon S1pr1 deletion
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Naïve CD4 cells (CD45.2+CD4+,CD62L high,CD44 low) isolated from lymph nodes of mixed bone marrow chimeras 5 days after induced S1pr1 deletion.
Overall design CD45.1+ mice were reconstituted with a mix of BM from WT UBC:GFP mice and BM from S1pr1f/fUBC-CreERT2 CD45.2+ mice or littermate controls. S1pr1 was deleted by tamoxifen injection for 5 days. Naïve CD4+ CD62L high CD44 low CD45.2+ GFP- cells were sorted 5 days after last tamoxifen injection.
Contributor(s) Schwab S, Mendoza A, Elemento O, Verma A
Citation(s) 28538737
Submission date Mar 30, 2017
Last update date May 15, 2019
Contact name Susan Schwab
Phone 2122633718
Organization name new york university
Department Immunology
Lab 213
Street address 540 First Avenue
City new york
State/province NY
ZIP/Postal code 10016
Country USA
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM2560194 Ctrl
GSM2560195 Ctrl_1
GSM2560196 Ctrl_3
BioProject PRJNA381079
SRA SRP102799

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97249_RAW.tar 640.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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