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Series GSE97249 Query DataSets for GSE97249
Status Public on May 26, 2017
Title Cell intrinsic changes in transcription of naïve CD4 T cells upon S1pr1 deletion
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Naïve CD4 cells (CD45.2+CD4+,CD62L high,CD44 low) isolated from lymph nodes of mixed bone marrow chimeras 5 days after induced S1pr1 deletion.
 
Overall design CD45.1+ mice were reconstituted with a mix of BM from WT UBC:GFP mice and BM from S1pr1f/fUBC-CreERT2 CD45.2+ mice or littermate controls. S1pr1 was deleted by tamoxifen injection for 5 days. Naïve CD4+ CD62L high CD44 low CD45.2+ GFP- cells were sorted 5 days after last tamoxifen injection.
 
Contributor(s) Schwab S, Mendoza A, Elemento O, Verma A
Citation(s) 28538737
Submission date Mar 30, 2017
Last update date May 15, 2019
Contact name Susan Schwab
E-mail susan.schwab@med.nyu.edu
Phone 2122633718
Organization name new york university
Department Immunology
Lab 213
Street address 540 First Avenue
City new york
State/province NY
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM2560194 Ctrl
GSM2560195 Ctrl_1
GSM2560196 Ctrl_3
Relations
BioProject PRJNA381079
SRA SRP102799

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97249_RAW.tar 640.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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