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GEO accession:
Series GSE95541
Query DataSets for GSE95541
Status
Public on Dec 13, 2017
Title
Arid1a promotes tumor initiation but restrains progression and metastasis in liver cancer
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
29136504
Submission date
Feb 28, 2017
Last update date
Jul 25, 2021
Contact name
Xuxu Sun
Organization name
shanghai jiao tong university
Department
school of medicine
Street address
227 south chongqing road
City
shanghai
ZIP/Postal code
200025
Country
China
Platforms (1)
GPL19057
Illumina NextSeq 500 (Mus musculus)
Samples (62)
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GSM2515889
fvb-LAP-MYC;WT-T-ATAC-rep1
GSM2515890
fvb-LAP-MYC;WT-T-ATAC-rep2
GSM2515891
fvb-LAP-MYC;WT-T-ATAC-rep3
GSM2515892
fvb-LAP-MYC;WT-T-ATAC-rep4
GSM2515893
fvb-LAP-MYC;Arid1a Het-T-ATAC-rep1
GSM2515894
fvb-LAP-MYC;Arid1a Het-T-ATAC-rep2
GSM2515895
fvb-LAP-MYC;Arid1a Het-T-ATAC-rep3
GSM2515896
fvb-LAP-MYC;Arid1a Homo-T-ATAC-rep1
GSM2515897
fvb-LAP-MYC;Arid1a Homo-T-ATAC-rep2
GSM2515898
fvb-LAP-MYC;Arid1a Homo-T-ATAC-rep3
GSM2516033
mix-LAP-MYC;WT-T-rep1
GSM2516034
mix-LAP-MYC;WT-T-rep2
GSM2516035
mix-LAP-MYC;WT-T-rep3
GSM2516036
mix-LAP-MYC;WT-T-rep4
GSM2516037
mix-LAP-MYC;WT-T-rep5
GSM2516038
mix-LAP-MYC;WT-T-rep6
GSM2516039
mix-LAP-MYC;WT-T-rep7
GSM2516040
mix-LAP-MYC;WT-T-rep8
GSM2516041
mix-LAP-MYC;Arid1a Het-T-rep1
GSM2516042
mix-LAP-MYC;Arid1a Het-T-rep2
GSM2516043
mix-LAP-MYC;Arid1a Het-T-rep3
GSM2516044
mix-LAP-MYC;Arid1a Het-T-rep4
GSM2516045
mix-LAP-MYC;Arid1a Het-T-rep5
GSM2516046
mix-LAP-MYC;Arid1a Het-T-rep6
GSM2516047
mix-LAP-MYC;Arid1a Het-T-rep7
GSM2516048
mix-LAP-MYC;Arid1a Het-T-rep8
GSM2516049
fvb-LAP-MYC;WT-T-rep1
GSM2516050
fvb-LAP-MYC;WT-T-rep2
GSM2516051
fvb-LAP-MYC;WT-T-rep3
GSM2516052
fvb-LAP-MYC;WT-T-rep4
GSM2516053
fvb-LAP-MYC;Arid1a Het-T-rep1
GSM2516054
fvb-LAP-MYC;Arid1a Het-T-rep2
GSM2516055
fvb-LAP-MYC;Arid1a Het-T-rep3
GSM2516056
fvb-LAP-MYC;Arid1a Het-T-rep4
GSM2516057
fvb-LAP-MYC;Arid1a Homo-T-rep1
GSM2516058
fvb-LAP-MYC;Arid1a Homo-T-rep2
GSM2516059
fvb-LAP-MYC;Arid1a Homo-T-rep3
GSM2516060
fvb-LAP-MYC;Arid1a Homo-T-rep4
GSM2516061
Rag1-LAP-MYC;WT-adCre-N-rep1
GSM2516062
Rag1-LAP-MYC;WT-adCre-N-rep2
GSM2516063
Rag1-LAP-MYC;WT-adCre-N-rep3
GSM2516064
Rag1-LAP-MYC;WT-adARID1A-N-rep1
GSM2516065
Rag1-LAP-MYC;WT-adARID1A-N-rep2
GSM2516066
Rag1-LAP-MYC;WT-adARID1A-N-rep3
GSM2741694
fvb-LAP-MYC;WT-T-input-rep1
GSM2741695
fvb-LAP-MYC;WT-T-input-rep2
GSM2741696
fvb-LAP-MYC;WT-T-input-rep3
GSM2741697
fvb-LAP-MYC;Arid1a Het-T-input-rep1
GSM2741698
fvb-LAP-MYC;Arid1a Het-T-input-rep2
GSM2741699
fvb-LAP-MYC;Arid1a Het-T-input-rep3
GSM2741700
fvb-LAP-MYC;Arid1a Homo-T-input-rep1
GSM2741701
fvb-LAP-MYC;Arid1a Homo-T-input-rep2
GSM2741702
fvb-LAP-MYC;Arid1a Homo-T-input-rep3
GSM2741703
fvb-LAP-MYC;WT-T-MYC-rep1
GSM2741704
fvb-LAP-MYC;WT-T-MYC-rep2
GSM2741705
fvb-LAP-MYC;WT-T-MYC-rep3
GSM2741706
fvb-LAP-MYC;Arid1a Het-T-MYC-rep1
GSM2741707
fvb-LAP-MYC;Arid1a Het-T-MYC-rep2
GSM2741708
fvb-LAP-MYC;Arid1a Het-T-MYC-rep3
GSM2741709
fvb-LAP-MYC;Arid1a Homo-T-MYC-rep1
GSM2741710
fvb-LAP-MYC;Arid1a Homo-T-MYC-rep2
GSM2741711
fvb-LAP-MYC;Arid1a Homo-T-MYC-rep3
This SuperSeries is composed of the following SubSeries:
GSE95530
Arid1a promotes tumor initiation but restrains progression and metastasis in liver cancer [ATAC-seq]
GSE95537
Arid1a promotes tumor initiation but restrains progression and metastasis in liver cancer [RNA-seq]
GSE102607
Arid1a promotes tumor initiation but restrains progression and metastasis in liver cancer [ChIP-Seq]
Relations
BioProject
PRJNA377344
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Supplementary file
Size
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File type/resource
GSE95541_RAW.tar
3.0 Gb
(http)
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TAR (of BW, NARROWPEAK)
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