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Series GSE94898 Query DataSets for GSE94898
Status Public on Feb 07, 2019
Title Heme and GATA1 coordinately regulate erythroid differentiation [RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In mice lacking the heme exporter, FLVCR, differentiation fails at the CFU-E/proerythroblast stage from excessive heme and reactive oxygen species. We show that Flvcr1-deleted CFU-E/proerythroblasts have low GATA1 mRNA and GATA1-target gene mRNAs along with increased ribosomal protein mRNAs as a direct result of increased heme. Thus heme increases ribosomal protein transcription when globin production needs to be increased, and when heme is excessive, GATA1 is reduced allowing for normal termination of erythroid differentiation. This demonstrates that heme and GATA1 are co-master regulators of erythroid differentiation.
 
Overall design Total RNA obtained from erythroid cells of mice with Flvcr deleted compared to those of wild-type mice and wild-type mice treated with EPO.
 
Contributor(s) Doty R
Citation(s) 30530752
Submission date Feb 14, 2017
Last update date May 15, 2019
Contact name Shinya Tanaka
E-mail(s) stanaka@ifrec.osaka-u.ac.jp
Organization name Osaka University
Department Immunology Frontier Research Center
Street address 2nd Fl. IFReC Research Building, Osaka University 3-1 Yamadaoka, Suita
City Osaka
State/province Osaka
ZIP/Postal code 565-0871
Country Japan
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (127)
GSM2491503 Flvcr Deleted Cell 01
GSM2491504 Flvcr Deleted Cell 02
GSM2491505 Flvcr Deleted Cell 03
This SubSeries is part of SuperSeries:
GSE94917 Heme and GATA1 coordinately regulate erythroid differentiation
Relations
BioProject PRJNA374744
SRA SRP099691

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94898_RefSeq_mm9_expr_rpkm.txt.gz 3.0 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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