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Series GSE94005 Query DataSets for GSE94005
Status Public on Mar 23, 2017
Title Small RNA sequencing of wild-type and Mrpp3 knock out mouse heart mitochondria
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Small RNA sequencing was used to examine RNA degradation products in mitochondria from mice lacking the nuclease subunit of the mitochondrial RNase P (MRPP3).
 
Overall design RNA from purified mouse mitochondria from wild-type and Mrpp3 knock out mouse hearts was sequenced using Illumina TruSeq Small RNA Library methods.
 
Contributor(s) Siira SJ, Kuznetsova I, Filipovska A, Rackham O
Citation(s) 28201688
Submission date Jan 24, 2017
Last update date Jun 25, 2019
Contact name Stefan J Siira
Organization name The Kids Research Institute Australia
Department Precision Health
Lab Mitochondrial Medicine and Biology
Street address 15 Hospital Ave, Nedlands
City Perth
State/province Western Australia
ZIP/Postal code 6009
Country Australia
 
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (4)
GSM2466739 WT rep1
GSM2466740 WT rep2
GSM2466741 Mrpp3 rep1
Relations
BioProject PRJNA363046
SRA SRP097680

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94005_RAW.tar 1.4 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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