GEO Accession viewer

NCBI > GEO > Accession Display

Reviewer access | Sign Out

GEO help: Mouse over screen elements for information.

Series GSE91561

Query DataSets for GSE91561

Status

Public on Jan 04, 2017

Title

ChIP-seq from MCF-7 (ENCSR197DJH)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

SREBF1 ChIP-seq on human MCF-7

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR197DJH/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Dec 11, 2016

Last update date

May 15, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL11154

Illumina HiSeq 2000 (Homo sapiens)

Samples (2)

GSM2423141	ChIP-seq from MCF-7 (ENCLB496FAI)
GSM2423142	ChIP-seq from MCF-7 (ENCLB133NHZ)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE91561_ENCFF050MLH_signal_p-value_hg19.bigWig	2.1 Gb	(ftp)(http)	BIGWIG
GSE91561_ENCFF100GRL_conservative_idr_thresholded_peaks_hg19.bed.gz	132.9 Kb	(ftp)(http)	BED
GSE91561_ENCFF107QBJ_conservative_idr_thresholded_peaks_GRCh38.bigBed	304.0 Kb	(ftp)(http)	BIGBED
GSE91561_ENCFF117IEQ_peaks_GRCh38.bed.gz	6.9 Mb	(ftp)(http)	BED
GSE91561_ENCFF142QHC_optimal_idr_thresholded_peaks_GRCh38.bigBed	394.0 Kb	(ftp)(http)	BIGBED
GSE91561_ENCFF254KOD_fold_change_over_control_GRCh38.bigWig	2.1 Gb	(ftp)(http)	BIGWIG
GSE91561_ENCFF275WAD_optimal_idr_thresholded_peaks_GRCh38.bed.gz	191.5 Kb	(ftp)(http)	BED
GSE91561_ENCFF391QPU_signal_p-value_GRCh38.bigWig	2.1 Gb	(ftp)(http)	BIGWIG
GSE91561_ENCFF531PCT_peaks_hg19.bed.gz	6.9 Mb	(ftp)(http)	BED
GSE91561_ENCFF576UUX_optimal_idr_thresholded_peaks_hg19.bigBed	388.6 Kb	(ftp)(http)	BIGBED
GSE91561_ENCFF616IRT_conservative_idr_thresholded_peaks_GRCh38.bed.gz	133.4 Kb	(ftp)(http)	BED
GSE91561_ENCFF768JTV_peaks_hg19.bigBed	10.7 Mb	(ftp)(http)	BIGBED
GSE91561_ENCFF870CER_optimal_idr_thresholded_peaks_hg19.bed.gz	190.0 Kb	(ftp)(http)	BED
GSE91561_ENCFF911YFI_fold_change_over_control_hg19.bigWig	2.1 Gb	(ftp)(http)	BIGWIG
GSE91561_ENCFF976QJV_conservative_idr_thresholded_peaks_hg19.bigBed	301.8 Kb	(ftp)(http)	BIGBED
GSE91561_ENCFF982SDQ_peaks_GRCh38.bigBed	10.7 Mb	(ftp)(http)	BIGBED
GSE91561_RAW.tar	10.3 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record