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Series GSE90769 Query DataSets for GSE90769
Status Public on Mar 27, 2018
Title Inhibitors of LSD1 target demethylase-independent activity to induce differentiation in acute myeloid leukemia [anti-LSD1, MYB, and GFI1 ChIP-Seq]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To identify genomic binding regions, THP1 AML cells were subjected to ChIP sequencing (ChIPseq) using anti-LSD1, MYB or GFI1 antibodies.
 
Overall design To identify genomic binding regions, THP1 AML cells were subjected to ChIP sequencing (ChIPseq) using anti-LSD1, MYB or GFI1 antibodies in the presence or absence of an LSD1 inhibitor OG86.
 
Contributor(s) Somervaille T
Citation(s) 29590629
Submission date Dec 01, 2016
Last update date May 15, 2019
Contact name Tim C Somervaille
E-mail(s) tim.somervaille@cruk.manchester.ac.uk
Organization name Cancer Research UK Manchester Institute
Lab Leukaemia Biology Laboratory
Street address Wilmslow Road
City Manchester
State/province Lancashire
ZIP/Postal code M20 4BX
Country United Kingdom
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (6)
GSM2412278 LSD1 DMSO vehicle
GSM2412279 LSD1 OG86
GSM2412280 GFI1 DMSO vehicle
This SubSeries is part of SuperSeries:
GSE63222 Inhibitors of LSD1 target demethylase-independent activity to induce differentiation in acute myeloid leukemia
Relations
BioProject PRJNA355867
SRA SRP094439

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE90769_RAW.tar 3.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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