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Series GSE9055 Query DataSets for GSE9055
Status Public on Sep 13, 2008
Title Time course gene expression of HUVEC after TNF-alpha treatment
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The many steps involved in the production of a mature mammalian mRNA are extensively coupled, and levels of both precursors and products can be measured using expression and genomic tiling microarrays. Different probes in these arrays targeting the same transcript often give different signals; then, precursor (nascent) RNA – which is present transiently at low concentrations – is difficult to detect.
Keywords: TNFa stimulation time course of HUVEC
 
Overall design Using tumor necrosis factor a (TNF-alpha) to switch on transcription of selected human genes rapidly and synchronously, we apply samples collected every 15 min to arrays
 
Contributor(s) Kodama T, Xu M, Ohta Y, Minami T, Tsutsumi S, Komura D, Inoue K, Kobayashi M, Izumi A, Miura M, Meguro H, Fujii M, Oshida N, Kitakami J, Kimura H, Ishikawa S, Hamakubo T, Aburatani H, Cook PR, Ihara S
Citation(s) 19826084
Submission date Sep 14, 2007
Last update date Jan 08, 2019
Contact name Shuichi Tsutsumi
E-mail shuichi@genome.rcast.u-tokyo.ac.jp
Phone +81-3-5452-5352
Organization name The University of Tokyo
Lab Genome Science Div.
Street address 4-6-1
City Komaba
ZIP/Postal code 153-8904
Country Japan
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (25)
GSM229909 HUVEC_TNFa_0h15m
GSM229910 HUVEC_TNFa_0h30m
GSM229911 HUVEC_TNFa_0h45m
Relations
BioProject PRJNA102567

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE9055_RAW.tar 193.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
Raw data provided as supplementary file

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