|
| Status |
Public on May 29, 2018 |
| Title |
WGBS assessment of global methylation alterations in hematopoietic stem and progenitor cells [methyl-seq] |
| Organism |
Mus musculus |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
We generated global DNA methylation maps of 4 types of adult hematopoietic stem and progenitor cells sorted from wildtype C57BL/6 mice.
|
| |
|
| Overall design |
Whole genome bisulfite sequencing of cells using Illumina HiSeq 2500
|
| |
|
| Contributor(s) |
Qian P, Li L, Gogol M |
| Citation(s) |
29727682 |
| |
| Submission date |
Nov 03, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Madelaine Gogol |
| Organization name |
Stowers Institute
|
| Department |
Computational Biology Core
|
| Street address |
1000 E. 50th Street
|
| City |
Kansas City |
| State/province |
MO |
| ZIP/Postal code |
64110 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
| Samples (8)
|
| GSM2373804 |
long-term hematopoietic stem cell rep 1 |
| GSM2373805 |
long-term hematopoietic stem cell rep 2 |
| GSM2373806 |
intermediate-term hematopoietic stem cell rep 1 |
|
| This SubSeries is part of SuperSeries: |
| GSE89492 |
A retinoid-dependent and methylation-sensitive enhancer in Hoxb cluster maintains haematopoietic stem cells and prevents leukaemogenesis |
|
| Relations |
| BioProject |
PRJNA352389 |
| SRA |
SRP092540 |
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