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| Status |
Public on Dec 19, 2016 |
| Title |
UMI-based, single cell RNA sequencing of human nasal epithelial cells grown for 33 days at air liquid interface |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
5' selective RNA-seq of 96 single cells from human nasal epithelial cells. Cells grown for 33 days at an air liquid interface. RNAseq profiling was performed with N4H4 unique molecular identifiers processed on a Fluidigm C1. Sequencing was performed on a Ion Proton (Life Technologies).
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| |
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| Overall design |
Single cell from human nasal epithelium. 5' selective RNAseq profiling, 96 cells, unique molecular identifiers, custom library preparation.
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| |
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| Contributor(s) |
Arguel MJ, Lebrigand K, Paquet A, Ruiz-Garcia S, Zaragosi LE, Barbry P, Waldmann R |
| Citation(s) |
27940562 |
| |
| Submission date |
Oct 27, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Kevin Lebrigand |
| Organization name |
IPMC/CNRS
|
| Lab |
Functional Genomics Platform of Nice-Sophia-Antipolis, France.
|
| Street address |
660 route des lucioles
|
| City |
Valbonne - Sophia-Antipolis |
| ZIP/Postal code |
06560 |
| Country |
France |
| |
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| Platforms (1) |
| GPL17303 |
Ion Torrent Proton (Homo sapiens) |
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| Samples (96)
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| This SubSeries is part of SuperSeries: |
| GSE79136 |
A cost effective single cell RNA sequencing approach for the Fluidigm C1 |
|
| Relations |
| BioProject |
PRJNA350800 |
| SRA |
SRP092181 |
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