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Series GSE89205 Query DataSets for GSE89205
Status Public on Jun 16, 2017
Title RNA-sequencing in TGF-beta treated MDA-231-D cells transfected with ZEB1/ZEB2 siRNAs [RNA-seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We searched for roles of ZEB1 during EMT by RNA-seq in breast cancer cells.
 
Overall design Expression of mRNA in a basal type breast cancer cell line MDA-231-D transfected with ZEB1/ZEB2 siRNAs and stimulated with TGF-beta for 24 h.
 
Contributor(s) Katsura A, Tamura Y, Morikawa M, Sakurai T, Mizutani A, Morishita Y, Miyazono K, Koinuma D
Citation(s) 28618162
Submission date Oct 26, 2016
Last update date May 15, 2019
Contact name Daizo Koinuma
E-mail(s) d-koinuma@umin.ac.jp
Organization name University of Tokyo
Department Pathology
Street address Hongo 7-3-1, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (4)
GSM2360627 RNA-seq_si Negative control
GSM2360628 RNA-seq_si Negative control_TGF-beta treated
GSM2360629 RNA-seq_si ZEB1/ZEB2
This SubSeries is part of SuperSeries:
GSE89206 ZEB1-regulated inflammatory phenotype in breast cancer cells
Relations
BioProject PRJNA350680
SRA SRP092107

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89205_genes.fpkm_tracking.txt.gz 1.2 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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