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Series GSE89101 Query DataSets for GSE89101
Status Public on Nov 06, 2017
Title Nuclear and cellular expression data from the whole 16-cell stage Arabidopsis thaliana embryo and a cell type-specific expression atlas of the early Arabidopsis embryo
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary SuperSeries contain expression data from the nuclei of cell types involved in patterning events, with focus on root apical stem cell formation, at 16-cell stage, early globular stage and late globular stage in the early Arabidopsis embryo (atlas). Expression data comparing nuclear and cellular RNA isolated from whole 16-cell stage Arabidopsis embryos is also included.

This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 29116234
Submission date Oct 24, 2016
Last update date Jan 15, 2018
Contact name Joakim Palovaara
E-mail(s) joakim@uni-bremen.de
Organization name Wageningen Univeristy
Department Biochemistry
Lab Dolf Weijers Lab
Street address Stippeneng 4
City Wageningen
State/province Gelderland
ZIP/Postal code 6708WE
Country Netherlands
 
Platforms (2)
GPL22599 [AraGene-1_1-st] Arabidopsis Gene 1.1 ST Array [CDF: aragene11st_At_TAIRG version 19]
GPL22603 [AraGene-1_0-st] Arabidopsis Gene 1.0 ST Array [CDF: aragene10st_At_TAIRG version 19]
Samples (44)
GSM2358762 embryo, nuclei, biological replicate 1 [nEMB_16C1]
GSM2358763 embryo, nuclei, biological replicate 2 [nEMB_16C2]
GSM2358764 embryo, nuclei, biological replicate 3 [nEMB_16C3]
This SuperSeries is composed of the following SubSeries:
GSE89098 Nuclear and cellular expression data from the whole 16-cell stage Arabidopsis thaliana embryo
GSE89100 Cell type-specific expression atlas of the early Arabidopsis thaliana embryo
Relations
BioProject PRJNA350269

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89101_RAW.tar 244.2 Mb (http)(custom) TAR (of CEL)

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