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Series GSE8896 Query DataSets for GSE8896
Status Public on Feb 05, 2016
Title Flagellin-mediated effects of Salmonella enteritidis on gene expression in intestinal epithelial cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Analysis of gene expression in Caco-2 intestinal epithelial cells stimulated with flagellated or aflagellated S. enteritidis or recombinant flagellin. Results provide insight into how flagellin mediates innate immune responses in intestinal epithelial cells.
Keywords: Gene expression analysis
 
Overall design Caco-2 cells were grown in 100 mm dishes to 3 days post-confluence. Cells were then incubated for 2 h with the following four treatments: medium alone (control); flagellated S. enteritidis; aflagellated S. enteritidis; or recombinant flagellin. Three independent experiments were performed to give an N=3 for each treatment. Caco-2 RNA was extracted and hybridized to the Affymetrix GeneChip Human Genome U133 Plus 2.0 Array.
 
Contributor(s) Kelly D, Mulder IE
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Submission date Aug 29, 2007
Last update date Mar 25, 2019
Contact name Denise Kelly
E-mail(s) D.Kelly@rri.sari.ac.uk
Phone +44 1224 716648
Organization name University of Aberdeen
Lab Gut Immunology Group
Street address Institute of Medical Sciences
City Aberdeen
ZIP/Postal code AB25 2ZD
Country United Kingdom
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (12)
GSM224696 Caco-2 Control-1
GSM224697 Caco-2 Control-2
GSM224698 Caco-2 Control-3
Relations
BioProject PRJNA102285

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE8896_RAW.tar 63.4 Mb (http)(custom) TAR (of CEL)
SRA Run SelectorHelp
Raw data provided as supplementary file
Processed data included within Sample table

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