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Series GSE86456 Query DataSets for GSE86456
Status Public on Feb 01, 2018
Title Genes and mechanisms regulated by androgens as possible contributors to the male excess observed in autism [LNCaP]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We optimized ChIP-sequencing protocole and anti-androgen receptor (AR) antibodies on human prostate cancer cell line (LNCaP) after either DMSO (solvent) or DHT 100nM 4 hours treatment.
 
Overall design Examination of AR IP sequences with 2 anti-AR antibodies (commercial N-20 from SantaCruz or homemade 3279.4) after DMSO or DHT 100nM treatment by deep sequencing using Illumina HiSeq 2500
 
Contributor(s) Quartier A, Jost B, Le Gras S, Piton A
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Submission date Sep 06, 2016
Last update date May 15, 2019
Contact name Angélique Quartier
E-mail(s) a.quartier@inoviem.com
Organization name IGBMC
Street address 1, rue Laurent Fries
City Illkirch
ZIP/Postal code 67400
Country France
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM2302964 LnCap DMSO_IP_AR_N20
GSM2302965 LnCap DMSO_IP_AR_3279.4
GSM2302966 LnCap DMSO_input
This SubSeries is part of SuperSeries:
GSE86458 Genes and mechanisms regulated by androgens as possible contributors to the male excess observed in autism
Relations
BioProject PRJNA341958
SRA SRP086623

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86456_RAW.tar 523.8 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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