|
| Status |
Public on Sep 01, 2017 |
| Title |
SETBP1-WT and SETBP1-G870S epigenetic landscapes [ChIP-Seq] |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
ChIP-Seq experiments targeting H3K4me2, H3K4me3, H3K9ac, H3K27ac, H3K36me3 histone modifications have been performed in order to assess if SETBP1 binding to gDNA was associated with chromatin remodeling and to further characterize the mechanisms responsible for SETBP1-mediated transcriptional regulation
|
| |
|
| Overall design |
n=10: 5 histone marks in 2 conditions: Empty vector and SETBP1-G870S
|
| |
|
| Contributor(s) |
Piazza R, Magistroni V, Redaelli S, Mauri M, Peronaci M, Massimino L, Mezzatesta C, Pirola A, Gambacorti-Passerini C |
| Citation(s) |
29875417 |
| |
| Submission date |
Sep 01, 2016 |
| Last update date |
Aug 13, 2019 |
| Contact name |
Luca Massimino |
| E-mail(s) |
admin@lucamassimino.com
|
| Phone |
+393389039500
|
| Organization name |
Ospedale San Raffaele
|
| Department |
Gastroenterology
|
| Street address |
Via Olgettina, 58
|
| City |
Milano |
| State/province |
MI |
| ZIP/Postal code |
20100 |
| Country |
Italy |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (10)
|
|
| This SubSeries is part of SuperSeries: |
| GSE86335 |
SETBP1-WT and SETBP1-G870S epigenetic landscapes |
|
| Relations |
| BioProject |
PRJNA341460 |
| SRA |
SRP083949 |
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