|
| Status |
Public on Nov 01, 2017 |
| Title |
HNF4G, AR, FOXA1, H3K4me1, H3K27acetyl binding sites upon knockdown and overexpression of HNF4G in 22Rv1 and LNCaP prostate cancer cells respectively |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
HNF4G is a gastrointestinal tissue enriched master transcriptional regulator seen overexpressed in a subset of prostate cancer. Here we have mapped binding sites of HNF4G, AR, Foxa1, H3K4me1, H3K27acetyl upon knockdown and overexpression of HNF4G in in 22Rv1 and LNCaP cells respectively
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| |
|
| Overall design |
ChIPSeq mapping of HNF4G, AR, Foxa1, H3K4me1, H3K27acetyl upon knockdown and overexpression of HNF4G in in 22Rv1 and LNCaP cells respectively
|
| |
|
| Contributor(s) |
Shukla S, Chen Y |
| Citation(s) |
29153843, 40553565 |
| |
| Submission date |
Aug 12, 2016 |
| Last update date |
Aug 20, 2025 |
| Contact name |
Shipra Shukla |
| E-mail(s) |
shuklas@mskcc.org
|
| Organization name |
MSKCC
|
| Street address |
417 East 68th Street
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10065 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (24)
|
|
| This SubSeries is part of SuperSeries: |
| GSE85559 |
Expression profiling and occupancy after knockdown or over-expression of HFN1A or HNF4G in prostate cancer cells |
|
| Relations |
| BioProject |
PRJNA338787 |
| SRA |
SRP081514 |
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