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Series GSE85096 Query DataSets for GSE85096
Status Public on Oct 20, 2016
Title Reciprocal Regulation between the Circadian Clock and Hypoxia Signaling at the Genome Level in Mammal
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary we propose that the clock plays an important role in fine-tuning the hypoxic response under pathophysiological conditions, which can serve as a strategy to reduce the severity of fatal hypoxia-related diseases.
 
Overall design BMAL1 and HIF1a Chip-seq in U2OS cells at circadian peak and trough with DMOG or DMSO
 
Contributor(s) xiong w
Citation(s) 27773697
Submission date Aug 02, 2016
Last update date May 15, 2019
Contact name xiong will wei
E-mail(s) xiongwei@nibs.ac.cn
Organization name NIBS,Beijing
Street address 7 Science Park Road ZGC Life Science Park
City Beijing
ZIP/Postal code 102206
Country China
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (9)
GSM2257666 ChIP_hBMAL1-peak-DMOG CHIP-Seq
GSM2257667 ChIP_hBMAL1-trough-DMOG CHIP-Seq
GSM2257668 ChIP_hBMAL1-peak-DMSO CHIP-Seq
Relations
BioProject PRJNA336166
SRA SRP080805

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE85096_RAW.tar 2.3 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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