|
| Status |
Public on Jan 28, 2017 |
| Title |
Massively multiplex single-cell Hi-C |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Other
|
| Summary |
Proof-of-concept for a massively parallel single-cell version of the Hi-C protocol
|
| |
|
| Overall design |
Single-cell Hi-C
Raw data for GSM2254215, GSM2254216, GSM2254218, GSM2254219 and GSM2438426 were submitted to dbGaP due to patient privacy concerns. The raw data are available at dbGaP accession ID phs001269.v1.p1.
|
| |
|
| Contributor(s) |
Ramani V |
| Citation(s) |
28135255 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 HG006283 |
Massively parallel contiguity mapping: Massively Parallel Contiguity Mapping: Massively parallel contiguity mapping: Massively parallel contiguity mapping: Massively Parallel Contiguity Mapping: Massively Parallel Contiguity Mapping |
UNIVERSITY OF WASHINGTON |
Jay Ashok Shendure |
| U54 DK107979 |
University of Washington Center for Nuclear Organization and Function |
UNIVERSITY OF WASHINGTON |
William Stafford Noble, Jay Ashok Shendure |
|
| |
| Submission date |
Jul 27, 2016 |
| Last update date |
Aug 15, 2025 |
| Contact name |
Vijay Ramani |
| Organization name |
UCSF
|
| Department |
Biochemistry & Biophysics
|
| Lab |
Ramani Lab
|
| Street address |
600 16th St, GH-S312B
|
| City |
San Francisco |
| State/province |
California |
| ZIP/Postal code |
94143 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL22245 |
Illumina HiSeq 2500 (Homo sapiens; Mus musculus) |
|
| Samples (6)
|
|
| Relations |
| Reanalyzed by |
GSE305523 |
| BioProject |
PRJNA335638 |
| SRA |
SRP079988 |
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