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Series GSE84892 Query DataSets for GSE84892
Status Public on Feb 14, 2017
Title Sequential loss of plasticity during trophectoderm and inner cell mass lineage segregation in the mouse embryo
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report the whole transcriptome data of single-cells derived from the early 16-cell stage to the 64-cell stage in the mouse embryo.
 
Overall design RNA from 262 cells from 36 mouse embryos (16- to 64-cell stage)
 
Contributor(s) Posfai E, Petropoulos S, Barros F, Schell JP, Sandberg R, Lanner F, Rossant J
Citation(s) 28226240
Submission date Jul 27, 2016
Last update date May 15, 2019
Contact name Sophie Petropoulos
E-mail(s) sophie.petropoulos@ki.se
Organization name Karolinska Institutet
Street address liniskt ForskningscentrumĀ  Novum
City Stockholm
ZIP/Postal code 14186
Country Sweden
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (262)
GSM2253385 D1_517_701B
GSM2253386 D10_704_502B
GSM2253387 D100
Relations
BioProject PRJNA335566
SRA SRP079965

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84892_counts.txt.gz 4.8 Mb (ftp)(http) TXT
GSE84892_rpkm.txt.gz 14.4 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Processed data are available on Series record
Raw data are available in SRA

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