|
| Status |
Public on Dec 01, 2016 |
| Title |
Whole transcriptome analysis of lung squamouse cell carcinoma |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Discovery of novel diagnostic and/or prognostic biomarkers of lung squamous cell carcinoma based on a whole transcriptome analysis using RNA sequencing (RNA-seq). Transcriptomic profiles of 12 available samples, out of 87 recruited patients with lung squamous cell carcinoma (SCC) were generated using Ion Proton system.
|
| |
|
| Overall design |
Tumoral mRNA profiles of 12 patients with lung SCC were generated by deep sequencing, using Ion Proton system.
|
| |
|
| Contributor(s) |
Rokudai S, Otaka Y, Horikoshi I, Yoshiyama S, Kawabata R, Nishiyama M |
| Citation(s) |
28087642 |
| |
| Submission date |
Jul 13, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Susumu Rokudai |
| E-mail(s) |
srokudai@gunma-u.ac.jp
|
| Phone |
+81-27-220-7962
|
| Organization name |
Gunma University Graduate School of Medicine
|
| Department |
Molecular Pharmacology and Oncology
|
| Street address |
Showa-machi 3-39-22
|
| City |
Maebashi |
| State/province |
Gunma |
| ZIP/Postal code |
3718511 |
| Country |
Japan |
| |
|
| Platforms (1) |
| GPL17303 |
Ion Torrent Proton (Homo sapiens) |
|
| Samples (12)
|
|
| Relations |
| BioProject |
PRJNA328932 |
| SRA |
SRP078419 |
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