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Series GSE84236 Query DataSets for GSE84236
Status Public on Sep 18, 2017
Title Epigenetic restriction of embryonic and extraembryonic lineages mirrors the somatic transition to cancer
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Other
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 28959968
Submission date Jul 11, 2016
Last update date Jul 25, 2021
Contact name Jiantao Shi
E-mail(s) jshi@hsph.harvard.edu
Organization name dana farber cancer institute
Lab Michor lab
Street address 3 Blackfan Circle
City Boston
ZIP/Postal code 02115
Country USA
 
Platforms (2)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (200)
GSM2229958 Blastocyst_rep1_ATAC-seq
GSM2229959 Blastocyst_rep2_ATAC-seq
GSM2229960 Epiblast_rep1_ATAC-seq
This SuperSeries is composed of the following SubSeries:
GSE84232 Epigenetic restriction of embryonic and extraembryonic lineages mirrors the somatic transition to cancer (ATAC-seq)
GSE84234 Epigenetic restriction of embryonic and extraembryonic lineages mirrors the somatic transition to cancer (RNA-seq)
GSE84235 Epigenetic restriction of embryonic and extraembryonic lineages mirrors the somatic transition to cancer (WGBS)
Relations
BioProject PRJNA328450

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84236_RAW.tar 4.4 Gb (http)(custom) TAR (of BED, BW, TSV)
SRA Run SelectorHelp
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