NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE83970 Query DataSets for GSE83970
Status Public on Dec 12, 2016
Title Genome-wide Identification of Neuronal Activity-regulated Genes in Drosophila [Elav_ChR2]
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary We identified ARGs in a genome-wide manner, in fly brains as well as in sorted neurons; they included dopaminergic neurons (DA) and a subset of circadian-related neurons (PDF+ neurons).
 
Overall design Elav-GAL4;UAS-ChR2-XXL or Elav-GAL4 flies stimulated with 30-second blue LED and mRNA isolated and sequenced 0, 15, 30, 60 min after.
 
Contributor(s) Chen X, Rosbash M
Citation(s) 27936378
Submission date Jul 01, 2016
Last update date May 15, 2019
Contact name Xiao Chen
E-mail(s) chxiao@brandeis.edu
Organization name Brandeis University
Department Biology
Lab Rosbash Lab
Street address 415 South St
City Waltham
State/province MA
ZIP/Postal code 02451
Country USA
 
Platforms (1)
GPL22106 NextSeq 550 (Drosophila melanogaster)
Samples (24)
GSM2224661 Elav_CHR2-XXL_0min
GSM2224662 Elav_CHR2-XXL_15min
GSM2224663 Elav_CHR2-XXL_30min
This SubSeries is part of SuperSeries:
GSE83976 Genome-wide Identification of Neuronal Activity-regulated Genes in Drosophila
Relations
BioProject PRJNA327576
SRA SRP077739

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83970_RAW.tar 10.7 Mb (http)(custom) TAR (of FPKM_TRACKING)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap