GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Series GSE82466

Query DataSets for GSE82466

Status

Public on Jun 22, 2016

Title

WGBS from neural tube (ENCSR144UTF)

Project

Mouse ENCODE

Organism

Mus musculus

Experiment type

Methylation profiling by high throughput sequencing

Summary

Whole genome bisulfite-seq on embryonic 12.5 day mouse neural tube

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR144UTF/

Citation(s)

22955616

BioProject

PRJNA63471

Submission date

Jun 07, 2016

Last update date

May 15, 2019

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL17021

Illumina HiSeq 2500 (Mus musculus)

Samples (4)

More...

GSM2191236	WGBS from neural tube (ENCLB598SZY)
GSM2191237	WGBS from neural tube (ENCLB771BOY)
GSM2191238	WGBS from neural tube (ENCLB369PTG)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE82466_ENCFF019HLR_methylation_state_at_CHH_mm10.bigBed	9.8 Gb	(ftp)(http)	BIGBED
GSE82466_ENCFF222CLY_methylation_state_at_CHH_mm10.bed.gz	7.4 Gb	(ftp)(http)	BED
GSE82466_ENCFF231BLL_methylation_state_at_CpG_mm10.bed.gz	476.7 Mb	(ftp)(http)	BED
GSE82466_ENCFF369BXZ_methylation_state_at_CHH_mm10.bed.gz	7.3 Gb	(ftp)(http)	BED
GSE82466_ENCFF401HQU_signal_mm10.bigWig	4.6 Gb	(ftp)(http)	BIGWIG
GSE82466_ENCFF446JQX_methylation_state_at_CHH_mm10.bigBed	9.6 Gb	(ftp)(http)	BIGBED
GSE82466_ENCFF517YXU_methylation_state_at_CHG_mm10.bigBed	3.9 Gb	(ftp)(http)	BIGBED
GSE82466_ENCFF620LRM_methylation_state_at_CpG_mm10.bigBed	937.9 Mb	(ftp)(http)	BIGBED
GSE82466_ENCFF697TML_methylation_state_at_CpG_mm10.bed.gz	485.4 Mb	(ftp)(http)	BED
GSE82466_ENCFF749BME_methylation_state_at_CHG_mm10.bed.gz	2.3 Gb	(ftp)(http)	BED
GSE82466_ENCFF799SJQ_signal_mm10.bigWig	4.7 Gb	(ftp)(http)	BIGWIG
GSE82466_ENCFF800MLQ_methylation_state_at_CHG_mm10.bigBed	3.9 Gb	(ftp)(http)	BIGBED
GSE82466_ENCFF864WRU_methylation_state_at_CHG_mm10.bed.gz	2.3 Gb	(ftp)(http)	BED
GSE82466_ENCFF946DXV_methylation_state_at_CpG_mm10.bigBed	929.9 Mb	(ftp)(http)	BIGBED
GSE82466_RAW.tar	10.0 Kb	(http)(custom)	TAR (of TXT)
SRA Run Selector
Raw data provided as supplementary file
Processed data not provided for this record