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Series GSE81256 Query DataSets for GSE81256
Status Public on May 10, 2016
Title Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility [ChIP-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We describe Nfib as an important regulator of chromatin accessibility in SCLC.
 
Overall design We performed ChIP seq for Nfib in three different cell lines. Replicates of input and pulldowns for three cell lines is given.
 
Contributor(s) Denny S, Yang D, Sage J, Greenleaf W, Winslow M
Citation(s) 27374332
Submission date May 09, 2016
Last update date May 15, 2019
Contact name William Greenleaf
E-mail(s) wjg@stanford.edu
Organization name Stanford University
Street address 279 Campus Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (12)
GSM2147629 16T_input1 [ChIP-seq]
GSM2147630 16T_input2 [ChIP-seq]
GSM2147631 16T_PD1 [ChIP-seq]
This SubSeries is part of SuperSeries:
GSE81258 Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility
Relations
BioProject PRJNA321072
SRA SRP074734

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE81256_16T_chip_FE.s20.w150.bw 756.4 Mb (ftp)(http) BW
GSE81256_16T_chip_peaks.bed.gz 130 b (ftp)(http) BED
GSE81256_KP1_chip_FE.s20.w150.bw 642.5 Mb (ftp)(http) BW
GSE81256_KP1_chip_peaks.bed.gz 280.8 Kb (ftp)(http) BED
GSE81256_KP22_chip_FE.s20.w150.bw 840.4 Mb (ftp)(http) BW
GSE81256_KP22_chip_peaks.bed.gz 117.3 Kb (ftp)(http) BED
GSE81256_merged_peaks.deseq_results.all.csv.gz 2.4 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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