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Series GSE81200 Query DataSets for GSE81200
Status Public on Sep 07, 2017
Title ENAP1 is involoved in the Histone H3K23 acetylation- and EIN3- mediated ethylene response
Organism Arabidopsis thaliana
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report that ethylene reduce the ENAP1 binding. We perform Chip-sequencing of ENAP1 using chromatins isolated from 3-day old etiolated Col-0/ein2/ein3eil1 seedlings treated with ethylene or air gas. Results show that ethylene reduce ENAP1 binding in TSS region of EIN3 targeted genes that are regulated at the transcriptional level by ethylene.
Overall design Examination of 1 different protein binding in 3 Arabidopsis lines which under 2 different treatment.
Contributor(s) Qiao H, Wang L, Zhang F
Citation(s) 28874528
Submission date May 06, 2016
Last update date May 15, 2019
Contact name Hong Qiao
Organization name The University of Texas at Austin
Department Department of Molecular Biosciences
Lab Qiao lab
Street address 2506 speedway, NMS5.324
City Austin
State/province TEXAS
ZIP/Postal code 78731
Country USA
Platforms (1)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (16)
GSM2144521 COL_ENAP1_air_ChIPseq_rep1
GSM2144522 COL_ENAP1_air_ChIPseq_rep2
GSM2144523 COL_air_ENAP1_input rep1
BioProject PRJNA321020
SRA SRP074584

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE81200_30_34vsC1_C5_control_lambda.bedGraph.gz 185.8 Mb (ftp)(http) BEDGRAPH
GSE81200_30_34vsC1_C5_treat_pileup.bedGraph.gz 92.1 Mb (ftp)(http) BEDGRAPH
GSE81200_38_42vsC9_C13_control_lambda.bedGraph.gz 116.8 Mb (ftp)(http) BEDGRAPH
GSE81200_38_42vsC9_C13_treat_pileup.bedGraph.gz 124.2 Mb (ftp)(http) BEDGRAPH
GSE81200_50_46vsC17_C21_control_lambda.bedGraph.gz 110.3 Mb (ftp)(http) BEDGRAPH
GSE81200_50_46vsC17_C21_treat_pileup.bedGraph.gz 42.9 Mb (ftp)(http) BEDGRAPH
GSE81200_C16_C12vsC11_C15_control_lambda.bedGraph.gz 173.6 Mb (ftp)(http) BEDGRAPH
GSE81200_C16_C12vsC11_C15_treat_pileup.bedGraph.gz 199.7 Mb (ftp)(http) BEDGRAPH
GSE81200_C24_C20vsC19_C23_control_lambda.bedGraph.gz 158.2 Mb (ftp)(http) BEDGRAPH
GSE81200_C24_C20vsC19_C23_treat_pileup.bedGraph.gz 195.1 Mb (ftp)(http) BEDGRAPH
GSE81200_C8_C4vsC3_C7_control_lambda.bedGraph.gz 181.4 Mb (ftp)(http) BEDGRAPH
GSE81200_C8_C4vsC3_C7_treat_pileup.bedGraph.gz 94.3 Mb (ftp)(http) BEDGRAPH
GSE81200_macs2.optimal.30_34vsC1_C5.narrowPeak.gz 188.0 Kb (ftp)(http) NARROWPEAK
GSE81200_macs2.optimal.38_42vsC9_C13.narrowPeak.gz 79.5 Kb (ftp)(http) NARROWPEAK
GSE81200_macs2.optimal.50_46vsC17_C21.narrowPeak.gz 103.1 Kb (ftp)(http) NARROWPEAK
GSE81200_macs2.optimal.C16_C12vsC11_C15.narrowPeak.gz 111.4 Kb (ftp)(http) NARROWPEAK
GSE81200_macs2.optimal.C24_C20vsC19_C23.narrowPeak.gz 79.7 Kb (ftp)(http) NARROWPEAK
GSE81200_macs2.optimal.C8_C4vsC3_C7.narrowPeak.gz 118.1 Kb (ftp)(http) NARROWPEAK
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Processed data are available on Series record

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