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Series GSE8112 Query DataSets for GSE8112
Status Public on Jun 19, 2007
Title Expression data from soybean seed compartments with embryos at the early maturation stage
Organism Glycine max
Experiment type Expression profiling by array
Summary We microdissected each compartment from 8-micron paraffin sections using the Leica LMD6000 system to identify all genes active in different compartments of a soybean seed containing a early maturation-stage embryo.
Keywords: cell type comparison
 
Overall design early maturation-stage seed compartments were isolated using the Leica LMD6000 system. Total RNA was amplified and hybridized with Affymetrix Soybean Genome Arrays.
Web link http://estdb.biology.ucla.edu/seed
 
Contributor(s) Li S, Cheng C, Wagmaister JA, Bui AQ, Le BH, Goldberg RB, Harada JJ
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 13, 2007
Last update date Nov 22, 2016
Contact name Bob Goldberg
E-mail(s) bobglab@mcdb.ucla.edu
Phone 310-825-3270
Organization name University of California, Los Angeles
Department Molecular, Cell and Developmental Biology
Street address 610 Charles E Young Drive East
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platforms (1)
GPL4592 [Soybean] Affymetrix Soybean Genome Array
Samples (34)
GSM201096 Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 1
GSM201097 Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 2
GSM201098 Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 1
Relations
BioProject PRJNA100981

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE8112_RAW.tar 156.3 Mb (http)(custom) TAR (of CEL)
Raw data provided as supplementary file
Processed data included within Sample table

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