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Series GSE80474 Query DataSets for GSE80474
Status Public on Dec 07, 2016
Title Investigating Conservation of the Cell-Cycle-Regulated Transcriptional Program in the Fungal Pathogen, Cryptococcus neoformans
Organisms Saccharomyces cerevisiae; Cryptococcus neoformans var. grubii
Experiment type Expression profiling by high throughput sequencing
Summary Cell-cycle transcript dynamics from two species of wild-type budding yeast growing at 30 degrees Celsius in rich media: Saccharomyces cerevisiae (BF264-15D background) and Cryptococcus neoformans var. grubii (H99F background). We compared programs of cell-cycle-regulated genes between distantly related budding yeasts.
 
Overall design One time course experiment for each yeast over multiple cell cycles
 
Contributor(s) Kelliher CM, Leman AR, Sierra CS, Haase SB
Citation(s) 27918582
Submission date Apr 20, 2016
Last update date Mar 11, 2019
Contact name Steven Haase
E-mail shaase@duke.edu
Organization name Duke University
Department Biology
Street address Box 90338
City Durham
State/province NC
ZIP/Postal code 27708
Country USA
 
Platforms (2)
GPL17342 Illumina HiSeq 2500 (Saccharomyces cerevisiae)
GPL21750 Illumina HiSeq 2500 (Cryptococcus neoformans var. grubii)
Samples (74)
GSM2128020 Scerevisiae_YEPD_aF_0min
GSM2128021 Scerevisiae_YEPD_aF_5min
GSM2128022 Scerevisiae_YEPD_aF_10min
Relations
BioProject PRJNA319029
SRA SRP073615

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE80474_Cneoformans_normalized.txt.gz 474.1 Kb (ftp)(http) TXT
GSE80474_Scerevisiae_normalized.txt.gz 964.9 Kb (ftp)(http) TXT
Raw data are available in SRA
Processed data is available on Series record

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