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Series GSE77770 Query DataSets for GSE77770
Status Public on Apr 01, 2016
Title Regulation of androgen receptor signaling by Oct1 recruitment in prostate cancer
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Prostate cancer is the most common cancer in men and AR downstream signalings promote prostate cancer cell proliferation. To investigate the AR signaling, we performed ChIP sequence analysis in AR-positive prostate cancer cell lines, LNCaP and VCaP. In addition, we also examined the effect of PI polyamide specificly inhibit Oct1 binding to AR occupied-regions.
 
Overall design ChIP sequence analysis of AR binding sites and epigenetic condition in two prostate cancer cells
 
Contributor(s) Takayama K, Inoue S
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Submission date Feb 10, 2016
Last update date May 15, 2019
Contact name Ken-ichi Takayama
Organization name Tokyo Metropolitan Institute of Gerontology
Street address Sakaecho
City Itabashi-ku
ZIP/Postal code 173-0015
Country Japan
 
Platforms (2)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (21)
GSM2058878 VCaP input
GSM2058879 VCaP control DHT AR
GSM2058880 VCaP siOCT1DHT AR
This SubSeries is part of SuperSeries:
GSE77771 Targeting Oct1 genomic function inhibits androgen receptor signaling and castration-resistant prostate cancer growth
Relations
BioProject PRJNA311511
SRA SRP069854

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77770_RAW.tar 3.7 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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