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| Status |
Public on Feb 06, 2016 |
| Title |
Genome-wide evaluation of change in lncRNA expression in non-functioning pituitary adenoma using formalin-fixed and paraffin-embedded tissue specimens |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
Long noncoding RNAs (lncRNAs) have been implicated in the formation of many different types of tumors. However, expression profiles and potential functions of lncRNAs in non-functioning pituitary adenomas (NFPAs) have not been systematically evaluated.
We evaluated the expression profiles and potential functions of lncRNAs in non-functioning pituitary adenomas (NFPAs).
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| Overall design |
10 formalin-fixed and paraffin-embedded (FFPE) tissue specimens (5 non-functioning pituitary adenomas (NFPAs) and 5 normal pituitaries(NPs)) were selected for RNA extraction and hybridization on Affymetrix microarrays. The NFPAs team was designed as the Tumor group (T), while the NPs team was designed as Normal group (N).
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| Contributor(s) |
Xing WK, Qi ZY, Huang C, Zhang N, Gao HQ, Li Y, Qiu MY, Guo LC, Xie Y, Fang Q, Hui GZ |
| Citation(s) |
30504132 |
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| Submission date |
Feb 03, 2016 |
| Last update date |
Feb 14, 2019 |
| Contact name |
weikang xing |
| E-mail(s) |
xingweikang123@sina.com
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| Organization name |
The First Affiliated Hospital of Soochow University
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| Street address |
188 shizi street
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| City |
suzhou |
| ZIP/Postal code |
215000 |
| Country |
China |
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| Platforms (2) |
| GPL17585 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [probe set (exon) version] |
| GPL17586 |
[HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version] |
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| Samples (20)
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| GSM2053564 |
FFPE specimen of NFPA, biological rep1 [gene-level] |
| GSM2053565 |
FFPE specimen of NFPA, biological rep2 [gene-level] |
| GSM2053566 |
FFPE specimen of NFPA, biological rep3 [gene-level] |
| GSM2053567 |
FFPE specimen of NFPA, biological rep4 [gene-level] |
| GSM2053568 |
FFPE specimen of NFPA, biological rep5 [gene-level] |
| GSM2053569 |
FFPE specimen of NP, biological rep1 [gene-level] |
| GSM2053570 |
FFPE specimen of NP, biological rep2 [gene-level] |
| GSM2053571 |
FFPE specimen of NP, biological rep3 [gene-level] |
| GSM2053572 |
FFPE specimen of NP, biological rep4 [gene-level] |
| GSM2053573 |
FFPE specimen of NP, biological rep5 [gene-level] |
| GSM2055155 |
FFPE specimen of NFPA, biological rep1 [exon-level] |
| GSM2055156 |
FFPE specimen of NFPA, biological rep2 [exon-level] |
| GSM2055157 |
FFPE specimen of NFPA, biological rep3 [exon-level] |
| GSM2055158 |
FFPE specimen of NFPA, biological rep4 [exon-level] |
| GSM2055159 |
FFPE specimen of NFPA, biological rep5 [exon-level] |
| GSM2055160 |
FFPE specimen of NP, biological rep1 [exon-level] |
| GSM2055161 |
FFPE specimen of NP, biological rep2 [exon-level] |
| GSM2055162 |
FFPE specimen of NP, biological rep3 [exon-level] |
| GSM2055163 |
FFPE specimen of NP, biological rep4 [exon-level] |
| GSM2055164 |
FFPE specimen of NP, biological rep5 [exon-level] |
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| Relations |
| BioProject |
PRJNA311003 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE77517_RAW.tar |
386.7 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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