NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE77360 Query DataSets for GSE77360
Status Public on Jul 13, 2017
Title Gene Expression Changes in Definitive Endoderm in response to GATA6-depletion (ChIP-seq)
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary GATA6 is required for proper definitive endoderm formation. The mechanism of this process is poorly understood
 
Overall design We used ChIP-Sequencing to identify genes that are direct targets of GATA6 during human endoderm specification using hES differentiation
 
Contributor(s) Duncan S, Fisher J
Citation(s) 28606935
Submission date Jan 28, 2016
Last update date May 15, 2019
Contact name Stephen A Duncan
E-mail(s) duncanst@musc.edu
Phone 843-792-9104
Organization name Medical University South Carolina
Department Regenerative Medicine and Cell Biology
Lab Duncan Lab
Street address 173 Ashley Avenue, BSB 6th Floor, Room 657A
City Charleston
State/province SC
ZIP/Postal code 29425
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (2)
GSM2050700 GATA6_CHIP
GSM2050701 GATA6_INPUT
This SubSeries is part of SuperSeries:
GSE81901 Gene Expression Changes in Definitive Endoderm in response to GATA6-depletion
Relations
BioProject PRJNA323364
SRA SRP075718

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77360_Gata6_Peaks.bed.gz 537.1 Kb (ftp)(http) BED
GSE77360_RAW.tar 717.0 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap