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| Status |
Public on Dec 02, 2019 |
| Title |
Next-gen sequencing for transcriptomic differences in HuH-7 human hepatocellular carcinoma cell line models of hepatotoxicity |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
The gene expression profiles were analyzed of HuH-7 cells treated with cytotoxic agents, such as acetaminophen, arsenic or copper, along with cells that were treated for potential benefits with either caffeine or exosomes isolated from pooled human sera
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| |
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| Overall design |
Ribosomal RNA depleted total RNAs for 9 different conditions were used to perfom high throughput sequensing by Ion Torrent Proton instrument
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| Contributor(s) |
Sharma Y, Tchaikovskaya T, Viswanathan P, Rogler C, Rhee DB, Broin PO, Quispe W, Maslov AY, Chinnasamy T, Golden A, Gupta S |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Dec 18, 2015 |
| Last update date |
Dec 03, 2019 |
| Contact name |
Sanjeev Gupta |
| E-mail(s) |
sanjeev.gupta@einsteinmed.org
|
| Organization name |
Albert Einstein College of Medicine
|
| Department |
Medicine
|
| Street address |
1300 Morris Park Ave.
|
| City |
Bronx |
| State/province |
NY |
| ZIP/Postal code |
10461 |
| Country |
USA |
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| Platforms (1) |
| GPL17303 |
Ion Torrent Proton (Homo sapiens) |
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| Samples (9)
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| Relations |
| BioProject |
PRJNA306420 |
| SRA |
SRP067553 |
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